Description : transcription factor (JUMONJI)

Gene families : OG0002916 (Archaeplastida) Phylogenetic Tree(s): OG0002916_tree ,
OG_05_0001878 (LandPlants) Phylogenetic Tree(s): OG_05_0001878_tree ,
OG_06_0001362 (SeedPlants) Phylogenetic Tree(s): OG_06_0001362_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: MA_138058g0010
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT3G48430 REF6 relative of early flowering 6 0.04 Archaeplastida
Mp3g07610.1 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 Archaeplastida
Pp3c11_24630V3.1 No alias relative of early flowering 6 0.04 Archaeplastida
Pp3c7_8710V3.1 No alias Zinc finger (C2H2 type) family protein / transcription... 0.02 Archaeplastida
Zm00001e028534_P001 No alias histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
InterPro domains Description Start Stop
IPR003349 JmjN 17 50
IPR003347 JmjC_dom 371 483
No external refs found!