Description : RNA pseudouridine synthase 7 OS=Oryza sativa subsp. japonica (sp|q0e0y3|pus7_orysj : 109.0)
Gene families : OG0004898 (Archaeplastida) Phylogenetic Tree(s): OG0004898_tree ,
OG_05_0007622 (LandPlants) Phylogenetic Tree(s): OG_05_0007622_tree ,
OG_06_0077510 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_139204g0010 | |
Cluster | HCCA: Cluster_403 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_32269g0010 | No alias | dual-specificity tRNA/rRNA pseudouridine synthase (RluA) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Neighborhood |
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Neighborhood |
BP | GO:0030488 | tRNA methylation | IEP | Neighborhood |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
CC | GO:0034708 | methyltransferase complex | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006145 | PsdUridine_synth_RsuA/RluD | 22 | 73 |
No external refs found! |