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MA_140553g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 569.0)


Gene families : OG0016348 (Archaeplastida) Phylogenetic Tree(s): OG0016348_tree ,
OG_05_0018260 (LandPlants) Phylogenetic Tree(s): OG_05_0018260_tree ,
OG_06_0027110 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_140553g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Gb_27282 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
Solyc12g011400.3.1 No alias Pentatricopeptide repeat-containing protein At1g53600,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 604 626
IPR002885 Pentatricopeptide_repeat 341 368
IPR002885 Pentatricopeptide_repeat 77 107
IPR002885 Pentatricopeptide_repeat 170 197
IPR002885 Pentatricopeptide_repeat 370 399
IPR032867 DYW_dom 703 762
IPR002885 Pentatricopeptide_repeat 136 169
IPR002885 Pentatricopeptide_repeat 266 312
IPR002885 Pentatricopeptide_repeat 429 476
IPR002885 Pentatricopeptide_repeat 529 576
No external refs found!