AT5G27670 (HTA7)

Aliases : HTA7

Description : histone H2A 7

Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G27670
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00221900	evm_27.TU.AmTr_v1...	Chromatin organisation.histones.H2A-type histone	0.03	Archaeplastida
AMTR_s00057p00215390	evm_27.TU.AmTr_v1...	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
AMTR_s00058p00158560	evm_27.TU.AmTr_v1...	Chromatin organisation.histones.H2A-type histone	0.08	Archaeplastida
AMTR_s00115p00128810	evm_27.TU.AmTr_v1...	Chromatin organisation.histones.H2A-type histone	0.03	Archaeplastida
Cre06.g264750	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g264950	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g265350	No alias	Chromatin organisation.histones.H2A-type histone	0.05	Archaeplastida
Cre06.g266700	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g268050	No alias	Chromatin organisation.histones.H2A-type histone	0.05	Archaeplastida
Cre06.g268300	No alias	Chromatin organisation.histones.H2A-type histone	0.05	Archaeplastida
Cre06.g271350	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g273900	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g274200	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g274800	No alias	Chromatin organisation.histones.H2A-type histone	0.05	Archaeplastida
Cre06.g275850	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre06.g276500	No alias	Chromatin organisation.histones.H2A-type histone	0.05	Archaeplastida
Cre06.g276950	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre12.g504500	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre12.g504750	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre12.g505550	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre12.g506250	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre13.g570100	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g708550	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g709200	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g710400	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g711700	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g713400	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
Cre17.g714500	No alias	Chromatin organisation.histones.H2A-type histone	0.06	Archaeplastida
GSVIVT01011034001	No alias	Chromatin organisation.histones.H2A-type histone	0.09	Archaeplastida
GSVIVT01014580001	No alias	Chromatin organisation.histones.H2A-type histone	0.09	Archaeplastida
GSVIVT01031123001	No alias	Chromatin organisation.histones.H2A-type histone	0.04	Archaeplastida
Gb_06384	No alias	histone (H2A)	0.07	Archaeplastida
Gb_07070	No alias	histone (H2A)	0.05	Archaeplastida
Gb_25326	No alias	histone (H2A)	0.06	Archaeplastida
LOC_Os03g17100.1	No alias	histone (H2A)	0.04	Archaeplastida
LOC_Os05g02300.1	No alias	histone (H2A)	0.04	Archaeplastida
LOC_Os07g36130.1	No alias	histone (H2A)	0.03	Archaeplastida
LOC_Os07g36140.1	No alias	histone (H2A)	0.04	Archaeplastida
LOC_Os08g33100.1	No alias	histone (H2A)	0.08	Archaeplastida
LOC_Os12g25120.1	No alias	histone (H2A)	0.03	Archaeplastida
MA_10425800g0010	No alias	histone (H2A)	0.05	Archaeplastida
MA_10426943g0010	No alias	histone (H2A)	0.04	Archaeplastida
MA_169054g0020	No alias	histone (H2A)	0.03	Archaeplastida
MA_213048g0010	No alias	histone (H2A)	0.06	Archaeplastida
MA_94328g0020	No alias	histone (H2A)	0.02	Archaeplastida
MA_962778g0010	No alias	histone (H2A)	0.04	Archaeplastida
Mp2g00760.1	No alias	histone (H2A)	0.03	Archaeplastida
Mp3g00840.1	No alias	histone (H2A)	0.04	Archaeplastida
Mp3g02370.1	No alias	histone (H2A)	0.02	Archaeplastida
Pp3c5_1791V3.1	No alias	histone H2A 10	0.03	Archaeplastida
Pp3c5_1800V3.1	No alias	histone H2A 10	0.03	Archaeplastida
Smo166626	No alias	Chromatin organisation.histones.H2A-type histone	0.02	Archaeplastida
Smo170948	No alias	Chromatin organisation.histones.H2A-type histone	0.03	Archaeplastida
Smo73637	No alias	Chromatin organisation.histones.H2A-type histone	0.03	Archaeplastida
Solyc01g099410.3.1	No alias	histone (H2A)	0.06	Archaeplastida
Solyc06g084430.4.1	No alias	histone (H2A)	0.06	Archaeplastida
Solyc09g010400.3.1	No alias	histone (H2A)	0.04	Archaeplastida
Solyc09g074300.1.1	No alias	histone (H2A)	0.09	Archaeplastida
Solyc09g082710.3.1	No alias	histone (H2A)	0.04	Archaeplastida
Solyc10g006560.4.1	No alias	histone (H2A)	0.06	Archaeplastida
Solyc11g073250.2.1	No alias	histone (H2A)	0.05	Archaeplastida
Solyc11g073260.2.1	No alias	histone (H2A)	0.05	Archaeplastida
Solyc12g005270.2.1	No alias	histone (H2A)	0.06	Archaeplastida
Zm00001e010232_P001	No alias	histone (H2A)	0.04	Archaeplastida
Zm00001e010515_P001	No alias	histone (H2A)	0.11	Archaeplastida
Zm00001e012144_P001	No alias	histone (H2A)	0.05	Archaeplastida
Zm00001e034815_P001	No alias	histone (H2A)	0.04	Archaeplastida
Zm00001e035183_P002	No alias	histone (H2A)	0.09	Archaeplastida
Zm00001e038465_P002	No alias	histone (H2A)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006816	calcium ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0070838	divalent metal ion transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072511	divalent inorganic cation transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000731	DNA synthesis involved in DNA repair	IEP	Neighborhood
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0004551	nucleotide diphosphatase activity	IEP	Neighborhood
MF	GO:0005539	glycosaminoglycan binding	IEP	Neighborhood
CC	GO:0005732	small nucleolar ribonucleoprotein complex	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006338	chromatin remodeling	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006949	syncytium formation	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
BP	GO:0008356	asymmetric cell division	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009828	plant-type cell wall loosening	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0019985	translesion synthesis	IEP	Neighborhood
MF	GO:0030337	DNA polymerase processivity factor activity	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0042276	error-prone translesion synthesis	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
MF	GO:0042834	peptidoglycan binding	IEP	Neighborhood
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
MF	GO:0043530	adenosine 5'-monophosphoramidase activity	IEP	Neighborhood
BP	GO:0044030	regulation of DNA methylation	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
MF	GO:0047627	adenylylsulfatase activity	IEP	Neighborhood
MF	GO:0047710	bis(5'-adenosyl)-triphosphatase activity	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood
BP	GO:0071897	DNA biosynthetic process	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	102	135
IPR007125	Histone_H2A/H2B/H3	4	99

External Links

No external refs found!

AT5G27670 (HTA7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation