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  5. AT5G28390

AT5G28390


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0002304 (Archaeplastida) Phylogenetic Tree(s): OG0002304_tree ,
OG_05_0002049 (LandPlants) Phylogenetic Tree(s): OG_05_0002049_tree ,
OG_06_0002095 (SeedPlants) Phylogenetic Tree(s): OG_06_0002095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28390
Cluster HCCA: Cluster_21


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
MF GO:0004105 choline-phosphate cytidylyltransferase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006366 transcription by RNA polymerase II IEP Neighborhood
BP GO:0006656 phosphatidylcholine biosynthetic process IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009556 microsporogenesis IEP Neighborhood
BP GO:0009660 amyloplast organization IEP Neighborhood
CC GO:0009705 plant-type vacuole membrane IEP Neighborhood
BP GO:0009959 negative gravitropism IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
BP GO:0034293 sexual sporulation IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0043934 sporulation IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046470 phosphatidylcholine metabolic process IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0048236 plant-type sporogenesis IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0052386 cell wall thickening IEP Neighborhood
BP GO:0052543 callose deposition in cell wall IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 101
No external refs found!