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Description : No annotation
Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0003873 (LandPlants) Phylogenetic Tree(s): OG_05_0003873_tree ,
OG_06_0002371 (SeedPlants) Phylogenetic Tree(s): OG_06_0002371_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_14910g0010 | |
| Cluster | HCCA: Cluster_199 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00103290 | evm_27.TU.AmTr_v1... | Organelle RRM domain-containing protein 2, mitochondrial... | 0.06 | Archaeplastida | |
| AMTR_s00013p00256900 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
| AMTR_s00114p00125610 | evm_27.TU.AmTr_v1... | Small RNA-binding protein 11, chloroplastic... | 0.03 | Archaeplastida | |
| AT1G18630 | GR-RBP6 | glycine-rich RNA-binding protein 6 | 0.03 | Archaeplastida | |
| AT2G21660 | CCR2, ATGRP7,... | cold, circadian rhythm, and rna binding 2 | 0.02 | Archaeplastida | |
| AT2G37510 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| AT3G23830 | GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | 0.1 | Archaeplastida | |
| AT4G13850 | GRP2, ATGRP2, GR-RBP2 | glycine-rich RNA-binding protein 2 | 0.08 | Archaeplastida | |
| AT5G61030 | GR-RBP3 | glycine-rich RNA-binding protein 3 | 0.04 | Archaeplastida | |
| GSVIVT01025527001 | No alias | Organelle RRM domain-containing protein 2, mitochondrial... | 0.01 | Archaeplastida | |
| MA_10436424g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | Archaeplastida | |
| MA_657071g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_77292g0010 | No alias | RNA editing factor (ORRM) | 0.05 | Archaeplastida | |
| Mp1g21200.1 | No alias | RNA editing factor (ORRM) | 0.02 | Archaeplastida | |
| Mp3g06220.1 | No alias | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... | 0.02 | Archaeplastida | |
| Mp4g15980.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | Archaeplastida | |
| Pp3c1_6280V3.1 | No alias | glycine-rich RNA-binding protein 3 | 0.02 | Archaeplastida | |
| Pp3c4_6610V3.1 | No alias | glycine-rich RNA-binding protein 3 | 0.12 | Archaeplastida | |
| Smo140819 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | Archaeplastida | |
| Smo406315 | No alias | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.02 | Archaeplastida | |
| Solyc01g104840.4.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | Archaeplastida | |
| Solyc10g051377.1.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.04 | Archaeplastida | |
| Zm00001e028481_P002 | No alias | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.1 | Archaeplastida | |
| Zm00001e035491_P001 | No alias | RNA editing factor (ORRM) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |