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  5. MA_15005g0010

MA_15005g0010


Description : Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana (sp|q9shl7|rp44a_arath : 178.0)


Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree ,
OG_05_0003821 (LandPlants) Phylogenetic Tree(s): OG_05_0003821_tree ,
OG_06_0004809 (SeedPlants) Phylogenetic Tree(s): OG_06_0004809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15005g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00129280 evm_27.TU.AmTr_v1... RNA processing.RNA decay.exosome complex.associated... 0.03 Archaeplastida
AT2G17510 EMB2763 ribonuclease II family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000640.22 No alias Exosome complex exonuclease RRP44 homolog A... 0.01 Archaeplastida
Cre14.g613850 No alias Exosome complex exonuclease RRP44 homolog A... 0.05 Archaeplastida
GSVIVT01022300001 No alias RNA processing.RNA decay.exosome complex.associated... 0.09 Archaeplastida
LOC_Os02g51780.1 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g03710.1 No alias exoribonuclease (Dis3/RRP44) 0.03 Archaeplastida
MA_89760g0020 No alias Inactive exonuclease DIS3L2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g18110.1 No alias Exosome complex exonuclease RRP44 homolog A... 0.04 Archaeplastida
Mp8g05460.1 No alias exoribonuclease (Dis3/RRP44) 0.04 Archaeplastida
Pp3c16_17530V3.1 No alias ribonuclease II family protein 0.04 Archaeplastida
Smo156135 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 Archaeplastida
Solyc02g082460.3.1 No alias exoribonuclease (Dis3/RRP44) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002716 PIN_dom 55 123
No external refs found!