MA_15142g0010


Description : Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana (sp|q9skn2|drb2_arath : 143.0)


Gene families : OG0000434 (Archaeplastida) Phylogenetic Tree(s): OG0000434_tree ,
OG_05_0000373 (LandPlants) Phylogenetic Tree(s): OG_05_0000373_tree ,
OG_06_0000829 (SeedPlants) Phylogenetic Tree(s): OG_06_0000829_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15142g0010
Cluster HCCA: Cluster_426

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 evm_27.TU.AmTr_v1... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 Archaeplastida
AT2G28380 DRB2 dsRNA-binding protein 2 0.05 Archaeplastida
AT3G26932 DRB3 dsRNA-binding protein 3 0.03 Archaeplastida
GSVIVT01033035001 No alias Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os09g33460.1 No alias Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.06 Archaeplastida
LOC_Os10g33970.1 No alias Double-stranded RNA-binding protein 6 OS=Oryza sativa... 0.03 Archaeplastida
MA_392655g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_79750g0010 No alias Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.03 Archaeplastida
Mp3g18950.1 No alias Double-stranded RNA-binding protein 5 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c14_16050V3.1 No alias dsRNA-binding protein 2 0.02 Archaeplastida
Pp3c17_16900V3.1 No alias dsRNA-binding protein 2 0.03 Archaeplastida
Smo441949 No alias Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Solyc11g069460.2.1 No alias Double-stranded RNA-binding protein 2 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 70 135
No external refs found!