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AT1G23460


Description : Pectin lyase-like superfamily protein


Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000273 (LandPlants) Phylogenetic Tree(s): OG_05_0000273_tree ,
OG_06_0000208 (SeedPlants) Phylogenetic Tree(s): OG_06_0000208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23460

Target Alias Description ECC score Gene Family Method Actions
AT2G43870 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01008061001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017302001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017307001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032118001 No alias Cell wall.pectin.modification and... 0.02 Archaeplastida
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.02 Archaeplastida
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 Archaeplastida
LOC_Os01g44970.1 No alias polygalacturonase (PGX1) 0.03 Archaeplastida
LOC_Os05g20020.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_63122g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 Archaeplastida
Zm00001e017565_P001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Neighborhood
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045793 positive regulation of cell size IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0080113 regulation of seed growth IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 97 420
No external refs found!