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  5. MA_15246g0010

MA_15246g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15246g0010
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18930 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g12560.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_38690g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.04 Archaeplastida
Solyc08g008080.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.04 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e007208_P002 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041370_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045277 respiratory chain complex IV IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 104 147
No external refs found!