1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G32450

AT5G32450


Description : RNA binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000598 (Archaeplastida) Phylogenetic Tree(s): OG0000598_tree ,
OG_05_0000999 (LandPlants) Phylogenetic Tree(s): OG_05_0000999_tree ,
OG_06_0010823 (SeedPlants) Phylogenetic Tree(s): OG_06_0010823_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G32450
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g50560.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e005469_P003 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP Neighborhood
MF GO:0004040 amidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006896 Golgi to vacuole transport IEP Neighborhood
BP GO:0007041 lysosomal transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
BP GO:0008333 endosome to lysosome transport IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
CC GO:0030904 retromer complex IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
MF GO:0043864 indoleacetamide hydrolase activity IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 67
No external refs found!