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  5. MA_153418g0010

MA_153418g0010


Description : Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana (sp|q6nq83|pp247_arath : 307.0)


Gene families : OG0005784 (Archaeplastida) Phylogenetic Tree(s): OG0005784_tree ,
OG_05_0003688 (LandPlants) Phylogenetic Tree(s): OG_05_0003688_tree ,
OG_06_0001308 (SeedPlants) Phylogenetic Tree(s): OG_06_0001308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_153418g0010
Cluster HCCA: Cluster_603

Target Alias Description ECC score Gene Family Method Actions
MA_156459g0010 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 5 37
IPR002885 Pentatricopeptide_repeat 180 212
IPR002885 Pentatricopeptide_repeat 408 435
IPR002885 Pentatricopeptide_repeat 287 314
IPR002885 Pentatricopeptide_repeat 218 267
IPR002885 Pentatricopeptide_repeat 113 161
IPR002885 Pentatricopeptide_repeat 341 390
IPR002885 Pentatricopeptide_repeat 43 91
IPR002885 Pentatricopeptide_repeat 319 339
No external refs found!