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  5. MA_15920g0010

MA_15920g0010


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_15920g0010
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00192390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.03 Archaeplastida
AT5G42630 KAN4, ATS Homeodomain-like superfamily protein 0.02 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026319001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_25991 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g40710.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os09g12770.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os09g23200.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c12_11150V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e000237_P002 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e033756_P003 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 96 146
No external refs found!