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  5. MA_161913g0010

MA_161913g0010


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 588.0)


Gene families : OG0012070 (Archaeplastida) Phylogenetic Tree(s): OG0012070_tree ,
OG_05_0032652 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0030020 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_161913g0010

Target Alias Description ECC score Gene Family Method Actions
Gb_02573 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Gb_15508 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_34410 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 750 772
IPR002885 Pentatricopeptide_repeat 549 574
IPR002885 Pentatricopeptide_repeat 87 110
IPR002885 Pentatricopeptide_repeat 188 211
IPR002885 Pentatricopeptide_repeat 216 245
IPR002885 Pentatricopeptide_repeat 431 473
IPR002885 Pentatricopeptide_repeat 474 520
IPR002885 Pentatricopeptide_repeat 276 318
IPR002885 Pentatricopeptide_repeat 676 722
IPR002885 Pentatricopeptide_repeat 373 420
IPR002885 Pentatricopeptide_repeat 112 159
IPR002885 Pentatricopeptide_repeat 575 622
No external refs found!