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Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0092793 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073679 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_163033g0010 | |
| Cluster | HCCA: Cluster_316 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G13710 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0045735 | nutrient reservoir activity | IEP | Neighborhood |
| BP | GO:0046677 | response to antibiotic | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 113 | 231 |
| No external refs found! |