MA_168127g0010


Description : component TAF4 of TFIId basal transcription regulation complex


Gene families : OG0003546 (Archaeplastida) Phylogenetic Tree(s): OG0003546_tree ,
OG_05_0002570 (LandPlants) Phylogenetic Tree(s): OG_05_0002570_tree ,
OG_06_0002068 (SeedPlants) Phylogenetic Tree(s): OG_06_0002068_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_168127g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009365001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.12 Archaeplastida
Gb_41115 No alias component TAF4 of TFIId basal transcription regulation complex 0.02 Archaeplastida
LOC_Os02g43750.1 No alias component TAF4 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Mp2g09230.1 No alias component TAF4 of TFIId basal transcription regulation complex 0.07 Archaeplastida
Pp3c4_10340V3.1 No alias TBP-associated factor 4 0.02 Archaeplastida
Solyc04g078050.3.1 No alias component TAF4 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Zm00001e002074_P001 No alias component TAF4 of TFIId basal transcription regulation complex 0.02 Archaeplastida
Zm00001e016810_P001 No alias component TAF4 of TFIId basal transcription regulation complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005669 transcription factor TFIID complex IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007900 TAF4 450 516
No external refs found!