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  5. MA_169947g0010

MA_169947g0010


Description : Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana (sp|q9sus4|rha1a_arath : 104.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_169947g0010
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Cpa|evm.model.tig00001155.20 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
MA_201391g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.13 Archaeplastida
MA_71146g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g082680.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e001605_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 90 134
No external refs found!