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  5. MA_170031g0010

MA_170031g0010


Description : Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana (sp|q9sa22|p2c06_arath : 153.0)


Gene families : OG0000340 (Archaeplastida) Phylogenetic Tree(s): OG0000340_tree ,
OG_05_0016390 (LandPlants) Phylogenetic Tree(s): OG_05_0016390_tree ,
OG_06_0018520 (SeedPlants) Phylogenetic Tree(s): OG_06_0018520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_170031g0010
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00202740 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 Archaeplastida
AT5G01700 No alias Protein phosphatase 2C family protein 0.02 Archaeplastida
AT5G26010 No alias Protein phosphatase 2C family protein 0.03 Archaeplastida
GSVIVT01035345001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
Gb_36020 No alias Probable protein phosphatase 2C 66 OS=Oryza sativa... 0.02 Archaeplastida
Solyc08g065540.3.1 No alias clade E phosphatase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 1 70
No external refs found!