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  5. MA_171070g0010

MA_171070g0010


Description : component IWS1 of SPT6-IWS1 transcription elongation complex


Gene families : OG0004220 (Archaeplastida) Phylogenetic Tree(s): OG0004220_tree ,
OG_05_0007207 (LandPlants) Phylogenetic Tree(s): OG_05_0007207_tree ,
OG_06_0007722 (SeedPlants) Phylogenetic Tree(s): OG_06_0007722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_171070g0010
Cluster HCCA: Cluster_503

Target Alias Description ECC score Gene Family Method Actions
Cre10.g441000 No alias Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01011111001 No alias Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os01g05420.1 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.03 Archaeplastida
Solyc06g066320.3.1 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.02 Archaeplastida
Zm00001e025802_P001 No alias component IWS1 of SPT6-IWS1 transcription elongation complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR017923 TFIIS_N 306 361
No external refs found!