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  5. MA_17249g0010

MA_17249g0010


Description : Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana (sp|q9fg21|atl71_arath : 85.5)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0000328 (SeedPlants) Phylogenetic Tree(s): OG_06_0000328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_17249g0010
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.03 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G30400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_04647 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_05004 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g44642.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_129478g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_144298g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_201391g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.04 Archaeplastida
MA_43248g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_61349g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_8362328g0010 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.04 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c21_17280V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc02g067700.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e022781_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 110 153
No external refs found!