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  5. MA_172610g0010

MA_172610g0010


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0009548 (LandPlants) Phylogenetic Tree(s): OG_05_0009548_tree ,
OG_06_0012413 (SeedPlants) Phylogenetic Tree(s): OG_06_0012413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_172610g0010
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.01 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Gb_01048 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.01 Archaeplastida
MA_10299189g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.01 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.01 Archaeplastida
Zm00001e010388_P001 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 147 224
No external refs found!