1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_175623g0010

MA_175623g0010


Description : Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana (sp|q9si53|pp147_arath : 573.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_175623g0010
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Gb_08772 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.08 Archaeplastida
LOC_Os02g53050.1 No alias RNA editing factor (CLB19) 0.05 Archaeplastida
Smo110980 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Smo128850 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 Archaeplastida
Smo134581 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Solyc03g114660.1.1 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 387 411
IPR002885 Pentatricopeptide_repeat 88 113
IPR002885 Pentatricopeptide_repeat 313 358
IPR002885 Pentatricopeptide_repeat 212 259
IPR002885 Pentatricopeptide_repeat 114 160
IPR002885 Pentatricopeptide_repeat 270 312
IPR032867 DYW_dom 486 609
No external refs found!