• MA_175789g0010


    Description : spermidine synthase


    Gene families : OG0001335 (Archaeplastida) Phylogenetic Tree(s): OG0001335_tree ,
    OG_05_0001567 (LandPlants) Phylogenetic Tree(s): OG_05_0001567_tree ,
    OG_06_0001721 (SeedPlants) Phylogenetic Tree(s): OG_06_0001721_tree

    Sequence : coding (download), protein (download)


    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood HRR: MA_175789g0010
    Cluster HCCA: Cluster_222

    Target Alias Description ECC score Gene Family Method Actions
    Cpa|evm.model.tig00000581.33 No alias Enzyme classification.EC_2 transferases.EC_2.5... 0.01 Archaeplastida
    Pp3c2_2980V3.1 No alias spermidine synthase 1 0.03 Archaeplastida

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence

    Type GO Term Name Search (advanced)
  • BLAST
  • Zm00001e015325_P001


    Description : co-chaperone (Hsp40)


    Gene families : OG0001328 (Archaeplastida) Phylogenetic Tree(s): OG0001328_tree ,
    OG_05_0001193 (LandPlants) Phylogenetic Tree(s): OG_05_0001193_tree ,
    OG_06_0001469 (SeedPlants) Phylogenetic Tree(s): OG_06_0001469_tree

    Sequence : coding (download), protein (download)


    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood HRR: Zm00001e015325_P001
    Cluster HCCA: Cluster_1

    Target Alias Description ECC score Gene Family Method Actions
    Cpa|evm.model.tig00000241.11 No alias DnaJ protein homolog 2 OS=Allium porrum 0.01 Archaeplastida
    Solyc05g055160.3.1 No alias co-chaperone (Hsp40) 0.03 Archaeplastida

    Type GO Term Name Evidence Source
    MF GO:0031072 heat shock protein binding IEA Interproscan
    MF GO:0051082 unfolded protein binding IEA Interproscan
    Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP Neighborhood
    BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
    MF GO:0003676 nucleic acid binding IEP Neighborhood
    MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
    MF GO:0004096 catalase activity IEP Neighborhood
    MF GO:0004175 endopeptidase activity IEP Neighborhood
    MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
    MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
    MF GO:0005524 ATP binding IEP Neighborhood
    CC GO:0005839 proteasome core complex IEP Neighborhood
    BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
    BP GO:0006508 proteolysis IEP Neighborhood
    MF GO:0008144 drug binding IEP Neighborhood
    MF GO:0008233 peptidase activity IEP Neighborhood
    MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
    MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
    MF GO:0017076 purine nucleotide binding IEP Neighborhood
    BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
    BP GO:0018208 peptidyl-proline modification IEP Neighborhood
    CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
    MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
    MF GO:0032553 ribonucleotide binding IEP Neighborhood
    MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
    MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
    BP GO:0034613 cellular protein localization IEP Neighborhood
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
    MF GO:0036094 small molecule binding IEP Neighborhood
    BP GO:0043038 amino acid activation IEP Neighborhood
    BP GO:0043039 tRNA aminoacylation IEP Neighborhood
    MF GO:0043167 ion binding IEP Neighborhood
    MF GO:0043168 anion binding IEP Neighborhood
    BP GO:0045048 protein insertion into ER membrane IEP Neighborhood
    BP GO:0051205 protein insertion into membrane IEP Neighborhood
    BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
    MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
    MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
    BP GO:0070727 cellular macromolecule localization IEP Neighborhood
    BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Neighborhood
    BP GO:0072657 protein localization to membrane IEP Neighborhood
    BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
    MF GO:0097159 organic cyclic compound binding IEP Neighborhood
    MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
    MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
    MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
    MF GO:1901363 heterocyclic compound binding IEP Neighborhood
    BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
    InterPro domains Description Start Stop
    IPR002939 DnaJ_C 125 346
    IPR001623 DnaJ_domain 14 72
    IPR001305 HSP_DnaJ_Cys-rich_dom 151 217
    No external refs found!