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  5. AT5G38396

AT5G38396


Description : F-box/RNI-like superfamily protein


Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38396
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.04 Archaeplastida
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT1G52650 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT1G64540 No alias F-box/FBD-like domains containing protein 0.04 Archaeplastida
AT2G42720 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.08 Archaeplastida
AT3G44060 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT3G44080 No alias F-box family protein 0.05 Archaeplastida
AT3G44090 No alias F-box family protein 0.08 Archaeplastida
AT3G44180 No alias syntaxin-related family protein 0.02 Archaeplastida
AT3G49150 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G54160 No alias RNI-like superfamily protein 0.05 Archaeplastida
AT3G58920 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G58950 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G59160 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G59170 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT3G59180 No alias Protein with RNI-like/FBD-like domains 0.07 Archaeplastida
AT3G59190 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT3G59240 No alias RNI-like superfamily protein 0.21 Archaeplastida
AT4G00320 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT4G13960 No alias F-box/RNI-like superfamily protein 0.06 Archaeplastida
AT4G22280 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G15620 No alias F-box/RNI-like superfamily protein 0.16 Archaeplastida
AT5G38392 No alias No description available 0.05 Archaeplastida
AT5G41630 No alias F-box/RNI-like superfamily protein 0.11 Archaeplastida
AT5G41830 No alias RNI-like superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009901 anther dehiscence IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 39
No external refs found!