Description : F-box/RNI-like superfamily protein
Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G38396 | |
Cluster | HCCA: Cluster_74 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G47915 | No alias | F-box family protein | 0.04 | Archaeplastida | |
AT1G48400 | No alias | F-box/RNI-like/FBD-like domains-containing protein | 0.02 | Archaeplastida | |
AT1G52650 | No alias | F-box/RNI-like superfamily protein | 0.05 | Archaeplastida | |
AT1G64540 | No alias | F-box/FBD-like domains containing protein | 0.04 | Archaeplastida | |
AT2G42720 | No alias | FBD, F-box, Skp2-like and Leucine Rich Repeat domains... | 0.08 | Archaeplastida | |
AT3G44060 | No alias | F-box/RNI-like superfamily protein | 0.08 | Archaeplastida | |
AT3G44080 | No alias | F-box family protein | 0.05 | Archaeplastida | |
AT3G44090 | No alias | F-box family protein | 0.08 | Archaeplastida | |
AT3G44180 | No alias | syntaxin-related family protein | 0.02 | Archaeplastida | |
AT3G49150 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT3G54160 | No alias | RNI-like superfamily protein | 0.05 | Archaeplastida | |
AT3G58920 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT3G58950 | No alias | F-box/RNI-like superfamily protein | 0.03 | Archaeplastida | |
AT3G59160 | No alias | F-box/RNI-like superfamily protein | 0.05 | Archaeplastida | |
AT3G59170 | No alias | F-box/RNI-like superfamily protein | 0.07 | Archaeplastida | |
AT3G59180 | No alias | Protein with RNI-like/FBD-like domains | 0.07 | Archaeplastida | |
AT3G59190 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT3G59240 | No alias | RNI-like superfamily protein | 0.21 | Archaeplastida | |
AT4G00320 | No alias | F-box/RNI-like superfamily protein | 0.07 | Archaeplastida | |
AT4G13960 | No alias | F-box/RNI-like superfamily protein | 0.06 | Archaeplastida | |
AT4G22280 | No alias | F-box/RNI-like superfamily protein | 0.04 | Archaeplastida | |
AT5G15620 | No alias | F-box/RNI-like superfamily protein | 0.16 | Archaeplastida | |
AT5G38392 | No alias | No description available | 0.05 | Archaeplastida | |
AT5G41630 | No alias | F-box/RNI-like superfamily protein | 0.11 | Archaeplastida | |
AT5G41830 | No alias | RNI-like superfamily protein | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003993 | acid phosphatase activity | IEP | Neighborhood |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | Neighborhood |
MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | Neighborhood |
MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | Neighborhood |
BP | GO:0006071 | glycerol metabolic process | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
MF | GO:0008420 | RNA polymerase II CTD heptapeptide repeat phosphatase activity | IEP | Neighborhood |
MF | GO:0008889 | glycerophosphodiester phosphodiesterase activity | IEP | Neighborhood |
BP | GO:0009901 | anther dehiscence | IEP | Neighborhood |
MF | GO:0015114 | phosphate ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015293 | symporter activity | IEP | Neighborhood |
MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
MF | GO:0015295 | solute:proton symporter activity | IEP | Neighborhood |
BP | GO:0015749 | monosaccharide transmembrane transport | IEP | Neighborhood |
BP | GO:0015858 | nucleoside transport | IEP | Neighborhood |
MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
BP | GO:0018126 | protein hydroxylation | IEP | Neighborhood |
BP | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | IEP | Neighborhood |
BP | GO:0019471 | 4-hydroxyproline metabolic process | IEP | Neighborhood |
BP | GO:0019511 | peptidyl-proline hydroxylation | IEP | Neighborhood |
CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Neighborhood |
BP | GO:0034219 | carbohydrate transmembrane transport | IEP | Neighborhood |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
BP | GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001810 | F-box_dom | 6 | 39 |
No external refs found! |