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Description : component VIP5/RTF1 of PAF1C transcription initiation and elongation complex
Gene families : OG0003042 (Archaeplastida) Phylogenetic Tree(s): OG0003042_tree ,
OG_05_0003234 (LandPlants) Phylogenetic Tree(s): OG_05_0003234_tree ,
OG_06_0002464 (SeedPlants) Phylogenetic Tree(s): OG_06_0002464_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_1773g0010 | |
| Cluster | HCCA: Cluster_485 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01006453001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Neighborhood |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0019902 | phosphatase binding | IEP | Neighborhood |
| MF | GO:0019903 | protein phosphatase binding | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Neighborhood |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004343 | Plus-3_dom | 252 | 358 |
| No external refs found! |