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Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 534.0)
Gene families : OG0031256 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029196 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027661 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_177435g0010 | |
| Cluster | HCCA: Cluster_197 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_28200 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 253 | 279 |
| IPR002885 | Pentatricopeptide_repeat | 525 | 550 |
| IPR002885 | Pentatricopeptide_repeat | 180 | 209 |
| IPR002885 | Pentatricopeptide_repeat | 281 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 178 |
| IPR002885 | Pentatricopeptide_repeat | 417 | 447 |
| IPR002885 | Pentatricopeptide_repeat | 389 | 415 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 497 |
| IPR002885 | Pentatricopeptide_repeat | 314 | 361 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 125 |
| IPR002885 | Pentatricopeptide_repeat | 552 | 598 |
| No external refs found! |