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MA_17795g0010


Description : histone (H2B)


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree ,
OG_06_0000187 (SeedPlants) Phylogenetic Tree(s): OG_06_0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_17795g0010
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cre06.g265400 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre06.g268250 No alias Chromatin organisation.histones.H2B-type histone 0.02 Archaeplastida
Cre12.g504550 No alias Chromatin organisation.histones.H2B-type histone 0.03 Archaeplastida
Cre17.g708600 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Smo73644 No alias Chromatin organisation.histones.H2B-type histone 0.05 Archaeplastida
Solyc06g005390.1.1 No alias histone (H2B) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 116
No external refs found!