1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G38590

AT5G38590


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0001094 (Archaeplastida) Phylogenetic Tree(s): OG0001094_tree ,
OG_05_0000663 (LandPlants) Phylogenetic Tree(s): OG_05_0000663_tree ,
OG_06_0000324 (SeedPlants) Phylogenetic Tree(s): OG_06_0000324_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38590
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Archaeplastida
AT1G55030 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT3G10750 No alias FBD domain family 0.05 Archaeplastida
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 Archaeplastida
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 Archaeplastida
AT3G49040 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT3G49045 No alias No description available 0.03 Archaeplastida
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida
AT3G52690 No alias RNI-like superfamily protein 0.06 Archaeplastida
AT4G00160 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT4G10410 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.08 Archaeplastida
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.08 Archaeplastida
AT5G56325 No alias FBD-like domain family protein 0.06 Archaeplastida
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.06 Archaeplastida
AT5G56430 No alias F-box/FBD-like domains containing protein 0.09 Archaeplastida
AT5G56452 No alias FBD-like domain family protein 0.05 Archaeplastida
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 Archaeplastida
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 Archaeplastida
AT5G56810 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G60610 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009652 thigmotropism IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
CC GO:0010005 cortical microtubule, transverse to long axis IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 38
IPR013101 Leu-rich_rpt_2 150 175
No external refs found!