AT5G38710

Description : Methylenetetrahydrofolate reductase family protein

Gene families : OG0002839 (Archaeplastida) Phylogenetic Tree(s): OG0002839_tree ,
OG_05_0003513 (LandPlants) Phylogenetic Tree(s): OG_05_0003513_tree ,
OG_06_0004497 (SeedPlants) Phylogenetic Tree(s): OG_06_0004497_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G38710
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os10g40360.1	No alias	proline dehydrogenase	0.02	Archaeplastida
Smo100996	No alias	Amino acid metabolism.degradation.proline.proline dehydrogenase	0.04	Archaeplastida
Zm00001e002294_P001	No alias	proline dehydrogenase	0.05	Archaeplastida
Zm00001e037909_P001	No alias	proline dehydrogenase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004657	proline dehydrogenase activity	IGI	Interproscan
MF	GO:0004657	proline dehydrogenase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	ISS	Interproscan
BP	GO:0006560	proline metabolic process	None	Extended
BP	GO:0006562	proline catabolic process	IGI	Interproscan
BP	GO:0006562	proline catabolic process	ISS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	IEP	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009063	cellular amino acid catabolic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009065	glutamine family amino acid catabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009620	response to fungus	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0098754	detoxification	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0000976	transcription regulatory region sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0001047	core promoter binding	IEP	Neighborhood
MF	GO:0001067	regulatory region nucleic acid binding	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006638	neutral lipid metabolic process	IEP	Neighborhood
BP	GO:0006639	acylglycerol metabolic process	IEP	Neighborhood
BP	GO:0006641	triglyceride metabolic process	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006874	cellular calcium ion homeostasis	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0007568	aging	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
BP	GO:0008300	isoprenoid catabolic process	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008643	carbohydrate transport	IEP	Neighborhood
MF	GO:0008728	GTP diphosphokinase activity	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009692	ethylene metabolic process	IEP	Neighborhood
BP	GO:0009693	ethylene biosynthetic process	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009723	response to ethylene	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
MF	GO:0009916	alternative oxidase activity	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010188	response to microbial phytotoxin	IEP	Neighborhood
BP	GO:0010260	animal organ senescence	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015301	anion:anion antiporter activity	IEP	Neighborhood
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015749	monosaccharide transmembrane transport	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016103	diterpenoid catabolic process	IEP	Neighborhood
BP	GO:0016115	terpenoid catabolic process	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Neighborhood
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016778	diphosphotransferase activity	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0019432	triglyceride biosynthetic process	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0033306	phytol metabolic process	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Neighborhood
BP	GO:0034308	primary alcohol metabolic process	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0042409	caffeoyl-CoA O-methyltransferase activity	IEP	Neighborhood
BP	GO:0042447	hormone catabolic process	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0042631	cellular response to water deprivation	IEP	Neighborhood
BP	GO:0043069	negative regulation of programmed cell death	IEP	Neighborhood
BP	GO:0043449	cellular alkene metabolic process	IEP	Neighborhood
BP	GO:0043450	alkene biosynthetic process	IEP	Neighborhood
MF	GO:0044212	transcription regulatory region DNA binding	IEP	Neighborhood
BP	GO:0044242	cellular lipid catabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0045487	gibberellin catabolic process	IEP	Neighborhood
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0045962	positive regulation of development, heterochronic	IEP	Neighborhood
BP	GO:0046460	neutral lipid biosynthetic process	IEP	Neighborhood
BP	GO:0046463	acylglycerol biosynthetic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Neighborhood
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055074	calcium ion homeostasis	IEP	Neighborhood
BP	GO:0060548	negative regulation of cell death	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071462	cellular response to water stimulus	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
BP	GO:0104004	cellular response to environmental stimulus	IEP	Neighborhood
BP	GO:1900673	olefin metabolic process	IEP	Neighborhood
BP	GO:1900674	olefin biosynthetic process	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood
BP	GO:1903173	fatty alcohol metabolic process	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002872	Proline_DH_dom	133	456

External Links

No external refs found!

AT5G38710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation