MA_178867g0010

Description : AAA-ATPase At4g25835 OS=Arabidopsis thaliana (sp|q8ry66|aatpd_arath : 365.0)

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0001286 (SeedPlants) Phylogenetic Tree(s): OG_06_0001286_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_178867g0010
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267180	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00019p00244450	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28510 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00019p00244830	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00024p00191310	evm_27.TU.AmTr_v1...	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT4G25835	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G40010	AATP1	AAA-ATPase 1	0.02	Archaeplastida
GSVIVT01032553001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.02	Archaeplastida
LOC_Os01g19260.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os03g02330.1	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os09g27340.1	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g28590.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g44190.1	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10150402g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_56516g0010	No alias	AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis...	0.04	Archaeplastida
MA_7834209g0010	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Mp7g18570.1	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Smo413949	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	Archaeplastida
Solyc03g082640.3.1	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e003357_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006534	cysteine metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009086	methionine biosynthetic process	IEP	Neighborhood
BP	GO:0009092	homoserine metabolic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
BP	GO:0019346	transsulfuration	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0050667	homocysteine metabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	21	118
IPR003959	ATPase_AAA_core	232	374

External Links

No external refs found!

MA_178867g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation