1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G38810

AT5G38810


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38810
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.1 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.04 Archaeplastida
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G46840 No alias F-box family protein 0.06 Archaeplastida
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT1G61060 No alias F-box family protein 0.03 Archaeplastida
AT1G67130 No alias F-box family protein 0.03 Archaeplastida
AT2G02890 No alias F-box family protein 0.07 Archaeplastida
AT2G23160 No alias F-box family protein 0.04 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.12 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT5G50220 No alias F-box family protein 0.12 Archaeplastida
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 51
IPR013187 F-box-assoc_dom_typ3 131 225
No external refs found!