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  5. MA_179334g0010

MA_179334g0010


Description : RING-H2-class E3 ligase


Gene families : OG0003731 (Archaeplastida) Phylogenetic Tree(s): OG0003731_tree ,
OG_05_0002581 (LandPlants) Phylogenetic Tree(s): OG_05_0002581_tree ,
OG_06_0002001 (SeedPlants) Phylogenetic Tree(s): OG_06_0002001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_179334g0010
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AT2G20030 No alias RING/U-box superfamily protein 0.01 Archaeplastida
MA_35091g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_426345g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g018310.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc07g007440.1.1 No alias RING-H2-class E3 ligase 0.2 Archaeplastida
Zm00001e032612_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!