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  5. MA_179420g0010

MA_179420g0010


Description : Cell division control protein 48 homolog C OS=Arabidopsis thaliana (sp|q9ss94|cd48c_arath : 248.0)


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0006701 (LandPlants) Phylogenetic Tree(s): OG_05_0006701_tree ,
OG_06_0006831 (SeedPlants) Phylogenetic Tree(s): OG_06_0006831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_179420g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G03340 No alias ATPase, AAA-type, CDC48 protein 0.02 Archaeplastida
Cre17.g700300 No alias Cell division control protein 48 homolog B... 0.02 Archaeplastida
GSVIVT01010343001 No alias Cell division control protein 48 homolog C... 0.03 Archaeplastida
LOC_Os08g44240.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
LOC_Os10g30580.1 No alias platform ATPase (CDC48) 0.03 Archaeplastida
Pp3c17_21090V3.1 No alias peroxin 6 0.02 Archaeplastida
Pp3c18_11480V3.1 No alias cell division cycle 48C 0.02 Archaeplastida
Solyc10g078320.2.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g084050.2.1 No alias platform ATPase (CDC48) 0.04 Archaeplastida
Zm00001e022089_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041667_P001 No alias component Pex6 of Pex1-Pex6 subcomplex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 56 155
No external refs found!