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  5. MA_179801g0020

MA_179801g0020


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 615.0)


Gene families : OG0013787 (Archaeplastida) Phylogenetic Tree(s): OG0013787_tree ,
OG_05_0092853 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073746 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_179801g0020
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
MA_72615g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 307
IPR002885 Pentatricopeptide_repeat 709 735
IPR002885 Pentatricopeptide_repeat 82 107
IPR002885 Pentatricopeptide_repeat 343 370
IPR002885 Pentatricopeptide_repeat 374 403
IPR002885 Pentatricopeptide_repeat 539 565
IPR002885 Pentatricopeptide_repeat 640 664
IPR002885 Pentatricopeptide_repeat 312 342
IPR002885 Pentatricopeptide_repeat 405 434
IPR032867 DYW_dom 739 828
IPR002885 Pentatricopeptide_repeat 566 613
IPR002885 Pentatricopeptide_repeat 108 155
IPR002885 Pentatricopeptide_repeat 465 511
IPR002885 Pentatricopeptide_repeat 208 255
No external refs found!