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MA_18005g0010


Description : mRNA poly-A-tail binding factor (PABP)


Gene families : OG0000771 (Archaeplastida) Phylogenetic Tree(s): OG0000771_tree ,
OG_05_0000645 (LandPlants) Phylogenetic Tree(s): OG_05_0000645_tree ,
OG_06_0015123 (SeedPlants) Phylogenetic Tree(s): OG_06_0015123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18005g0010
Cluster HCCA: Cluster_469

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00026490 evm_27.TU.AmTr_v1... Protein biosynthesis.translation initiation.mRNA... 0.07 Archaeplastida
Gb_00731 No alias mRNA poly-A-tail binding factor (PABP) 0.04 Archaeplastida
Smo74731 No alias Protein biosynthesis.translation initiation.mRNA... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 123 190
IPR000504 RRM_dom 214 282
IPR000504 RRM_dom 37 105
IPR000504 RRM_dom 317 349
No external refs found!