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Description : RmlC-like cupins superfamily protein
Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G38960 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00074p00061830 | evm_27.TU.AmTr_v1... | Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| AT5G39160 | No alias | RmlC-like cupins superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01020142001 | No alias | Germin-like protein 3-1 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
| GSVIVT01031082001 | No alias | Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| Gb_10684 | No alias | Germin-like protein subfamily 2 member 1 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Gb_18427 | No alias | Germin-like protein subfamily 2 member 1 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| LOC_Os03g48760.1 | No alias | Putative germin-like protein 3-4 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| LOC_Os03g48780.1 | No alias | Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| LOC_Os08g35750.1 | No alias | Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| MA_90878g0010 | No alias | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| MA_926447g0010 | No alias | Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Pp3c10_21090V3.1 | No alias | germin-like protein 5 | 0.01 | Archaeplastida | |
| Pp3c3_16510V3.1 | No alias | germin-like protein subfamily 2 member 2 precursor | 0.02 | Archaeplastida | |
| Solyc01g088260.3.1 | No alias | Putative germin-like protein 2-3 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| Solyc01g102895.1.1 | No alias | Germin-like protein subfamily 1 member 13 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Zm00001e032937_P001 | No alias | Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e039952_P001 | No alias | Putative germin-like protein 12-4 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| Zm00001e039953_P001 | No alias | Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| BP | GO:0006869 | lipid transport | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009299 | mRNA transcription | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| CC | GO:0031350 | intrinsic component of plastid membrane | IEP | Neighborhood |
| CC | GO:0031351 | integral component of plastid membrane | IEP | Neighborhood |
| BP | GO:0080117 | secondary growth | IEP | Neighborhood |
| BP | GO:0080190 | lateral growth | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006045 | Cupin_1 | 67 | 212 |
| No external refs found! |