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  5. MA_18020g0010

MA_18020g0010


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0000655 (SeedPlants) Phylogenetic Tree(s): OG_06_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18020g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00204230 evm_27.TU.AmTr_v1... Transcription factor GTE10 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G06230 GTE4 global transcription factor group E4 0.04 Archaeplastida
AT3G27260 GTE8 global transcription factor group E8 0.03 Archaeplastida
GSVIVT01001835001 No alias Transcription factor GTE8 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Gb_30202 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
LOC_Os01g11580.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os07g32420.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.06 Archaeplastida
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.05 Archaeplastida
Solyc07g062660.4.1 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
Solyc12g014170.2.1 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.08 Archaeplastida
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Zm00001e024861_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR027353 NET_dom 461 522
IPR001487 Bromodomain 289 373
No external refs found!