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  5. MA_180523g0010

MA_180523g0010


Description : cohesin cofactor (PDS5)


Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0001049 (LandPlants) Phylogenetic Tree(s): OG_05_0001049_tree ,
OG_06_0000558 (SeedPlants) Phylogenetic Tree(s): OG_06_0000558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_180523g0010
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
AMTR_s00065p00174980 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
AT4G31880 No alias LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... 0.03 Archaeplastida
AT5G47690 No alias binding 0.05 Archaeplastida
Cre01.g032550 No alias No description available 0.02 Archaeplastida
GSVIVT01002824001 No alias No description available 0.03 Archaeplastida
Gb_09525 No alias cohesin cofactor (PDS5) 0.05 Archaeplastida
Gb_23673 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
LOC_Os02g39920.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
LOC_Os04g25960.1 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Mp3g13850.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Pp3c10_24900V3.1 No alias binding 0.02 Archaeplastida
Pp3c20_23000V3.1 No alias binding 0.03 Archaeplastida
Pp3c23_10270V3.1 No alias binding 0.03 Archaeplastida
Solyc03g116970.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015094_P002 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!