AT5G39110


Description : RmlC-like cupins superfamily protein


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39110
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00121240 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00127600 evm_27.TU.AmTr_v1... Germin-like protein 8-2 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G18980 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G04200 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G05950 No alias RmlC-like cupins superfamily protein 0.07 Archaeplastida
AT5G39160 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01000061001 No alias No description available 0.04 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000066001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01000068001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000095001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000100001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01016761001 No alias Auxin-binding protein ABP19a OS=Prunus persica 0.03 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_07519 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_17046 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.03 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.05 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_18733 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_34489 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g14670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g72300.1 No alias Germin-like protein 1-4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os02g29000.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os03g58980.1 No alias Germin-like protein 3-7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g22080.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g08990.1 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09000.1 No alias Germin-like protein 8-6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09010.1 No alias Germin-like protein 8-7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g09020.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09040.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os08g09060.1 No alias Germin-like protein 8-10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g09080.1 No alias Germin-like protein 8-11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os12g05840.1 No alias Germin-like protein 12-1 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
LOC_Os12g05860.1 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
LOC_Os12g05870.1 No alias Putative germin-like protein 12-3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
LOC_Os12g05880.1 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10320441g0010 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10386538g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_740063g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_828526g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_90878g0010 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp2g01620.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp5g02530.1 No alias Oxalate oxidase 2 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp5g02540.1 No alias Germin-like protein 3-3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Pp3c10_21090V3.1 No alias germin-like protein 5 0.01 Archaeplastida
Pp3c17_21150V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c17_21180V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c17_21250V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c1_28050V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c23_1420V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1430V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c3_16510V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo109767 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo109968 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Smo229376 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo92738 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g088260.3.1 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc01g102380.5.1.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.06 Archaeplastida
Solyc01g102390.4.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.04 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.08 Archaeplastida
Solyc01g102910.4.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g113570.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.06 Archaeplastida
Solyc03g113580.1.1 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis... 0.07 Archaeplastida
Solyc05g006500.4.1 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g089990.3.1 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g090040.3.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e014725_P001 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021630_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e032256_P001 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e039952_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e039953_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e039958_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e039959_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008843 endochitinase activity IEP Neighborhood
BP GO:0009682 induced systemic resistance IEP Neighborhood
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP Neighborhood
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
MF GO:0015415 ATPase-coupled phosphate ion transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032103 positive regulation of response to external stimulus IEP Neighborhood
BP GO:0032104 regulation of response to extracellular stimulus IEP Neighborhood
BP GO:0032106 positive regulation of response to extracellular stimulus IEP Neighborhood
BP GO:0032107 regulation of response to nutrient levels IEP Neighborhood
BP GO:0032109 positive regulation of response to nutrient levels IEP Neighborhood
MF GO:0035885 exochitinase activity IEP Neighborhood
BP GO:0036293 response to decreased oxygen levels IEP Neighborhood
BP GO:0036294 cellular response to decreased oxygen levels IEP Neighborhood
MF GO:0043225 ATPase-coupled anion transmembrane transporter activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0070482 response to oxygen levels IEP Neighborhood
BP GO:0071453 cellular response to oxygen levels IEP Neighborhood
BP GO:0071456 cellular response to hypoxia IEP Neighborhood
BP GO:0080040 positive regulation of cellular response to phosphate starvation IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901684 arsenate ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 64 214
No external refs found!