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  5. MA_18093g0010

MA_18093g0010


Description : Pectinesterase 2.1 OS=Solanum lycopersicum (sp|p09607|pme21_sollc : 97.4)


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0008384 (SeedPlants) Phylogenetic Tree(s): OG_06_0008384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18093g0010
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00129p00070300 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.02 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.03 Archaeplastida
AT3G14300 PME26, ATPMEPCRC, ATPME26 pectinesterase family protein 0.02 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.03 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.02 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.05 Archaeplastida
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01031667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.02 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.04 Archaeplastida
Gb_15174 No alias pectin methylesterase 0.04 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g20980.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g57854.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34910.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10434624g0020 No alias pectin methylesterase 0.05 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.04 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_68362g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c10_1100V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c10_25030V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.05 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e011069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e019069_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e036264_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 162 272
No external refs found!