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MA_181514g0010


Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 658.0)


Gene families : OG0016282 (Archaeplastida) Phylogenetic Tree(s): OG0016282_tree ,
OG_05_0022161 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021576 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_181514g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Gb_01246 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.12 Archaeplastida
Gb_08671 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_12553 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 363 389
IPR002885 Pentatricopeptide_repeat 331 360
IPR002885 Pentatricopeptide_repeat 272 299
IPR002885 Pentatricopeptide_repeat 300 329
IPR002885 Pentatricopeptide_repeat 636 660
IPR002885 Pentatricopeptide_repeat 705 731
IPR002885 Pentatricopeptide_repeat 8 26
IPR002885 Pentatricopeptide_repeat 99 145
IPR002885 Pentatricopeptide_repeat 562 610
IPR002885 Pentatricopeptide_repeat 200 246
IPR002885 Pentatricopeptide_repeat 460 508
IPR032867 DYW_dom 735 859
No external refs found!