AT5G39270 (EXPA22, ATEXP22,...)

Aliases : EXPA22, ATEXP22, ATHEXP ALPHA 1.15, ATEXPA22, EXP22

Description : expansin A22

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0015459 (LandPlants) Phylogenetic Tree(s): OG_05_0015459_tree ,
OG_06_0015188 (SeedPlants) Phylogenetic Tree(s): OG_06_0015188_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39270
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00115760	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.05	Archaeplastida
AMTR_s00140p00077570	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
AT1G12560	ATEXP7, EXPA7,...	expansin A7	0.04	Archaeplastida
AT1G62980	EXPA18, EXP18,...	expansin A18	0.03	Archaeplastida
AT1G69530	ATEXPA1, EXP1,...	expansin A1	0.05	Archaeplastida
AT2G28950	EXPA6, ATEXP6,...	expansin A6	0.05	Archaeplastida
AT2G37640	ATEXPA3, EXP3,...	Barwin-like endoglucanases superfamily protein	0.03	Archaeplastida
AT5G02260	EXP9, EXPA9,...	expansin A9	0.04	Archaeplastida
AT5G39260	EXPA21, EXP21,...	expansin A21	0.1	Archaeplastida
AT5G39300	ATEXPA25,...	expansin A25	0.05	Archaeplastida
Cre14.g631950	No alias	No description available	0.03	Archaeplastida
GSVIVT01008762001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01025509001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01028474001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01029411001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
GSVIVT01030191001	No alias	Expansin-A8 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01032681001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
GSVIVT01033691001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Gb_01506	No alias	Expansin-A8 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_04404	No alias	alpha-class expansin	0.03	Archaeplastida
Gb_06127	No alias	alpha-class expansin	0.04	Archaeplastida
Gb_07438	No alias	alpha-class expansin	0.02	Archaeplastida
Gb_09118	No alias	alpha-class expansin	0.05	Archaeplastida
Gb_28036	No alias	Expansin-A29 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os03g06040.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os08g44790.1	No alias	alpha-class expansin	0.03	Archaeplastida
MA_100868g0010	No alias	alpha-class expansin	0.04	Archaeplastida
MA_104065g0020	No alias	alpha-class expansin	0.02	Archaeplastida
MA_10433559g0020	No alias	alpha-class expansin	0.02	Archaeplastida
MA_114349g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_130258g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_274624g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_275115g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_45587g0020	No alias	alpha-class expansin	0.03	Archaeplastida
MA_61945g0010	No alias	alpha-class expansin	0.03	Archaeplastida
Mp1g22700.1	No alias	alpha-class expansin	0.03	Archaeplastida
Mp1g22730.1	No alias	alpha-class expansin	0.03	Archaeplastida
Mp1g26350.1	No alias	alpha-class expansin	0.02	Archaeplastida
Mp2g18610.1	No alias	alpha-class expansin	0.03	Archaeplastida
Mp3g09760.1	No alias	alpha-class expansin	0.04	Archaeplastida
Mp5g20420.1	No alias	alpha-class expansin	0.03	Archaeplastida
Mp8g18860.1	No alias	alpha-class expansin	0.03	Archaeplastida
Pp3c18_19720V3.1	No alias	expansin A1	0.03	Archaeplastida
Pp3c20_5780V3.1	No alias	expansin A15	0.02	Archaeplastida
Smo409954	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Smo419575	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
Smo75237	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Smo90935	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
Solyc02g081210.3.1	No alias	alpha-class expansin	0.03	Archaeplastida
Solyc02g088100.3.1	No alias	alpha-class expansin	0.04	Archaeplastida
Solyc05g052250.3.1	No alias	alpha-class expansin	0.06	Archaeplastida
Solyc07g063210.3.1	No alias	alpha-class expansin	0.03	Archaeplastida
Solyc08g007780.3.1	No alias	Putative expansin-A30 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Solyc08g080060.4.1	No alias	alpha-class expansin	0.05	Archaeplastida
Solyc10g084780.3.1	No alias	alpha-class expansin	0.04	Archaeplastida
Solyc12g089380.2.1	No alias	alpha-class expansin	0.05	Archaeplastida
Zm00001e000429_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e004714_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e004719_P001	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e004720_P001	No alias	alpha-class expansin	0.04	Archaeplastida
Zm00001e004721_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e017221_P001	No alias	alpha-class expansin	0.02	Archaeplastida
Zm00001e038997_P001	No alias	alpha-class expansin	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006885	regulation of pH	IEP	Neighborhood
BP	GO:0007035	vacuolar acidification	IEP	Neighborhood
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Neighborhood
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0030641	regulation of cellular pH	IEP	Neighborhood
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Neighborhood
BP	GO:0045851	pH reduction	IEP	Neighborhood
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Neighborhood
BP	GO:0051452	intracellular pH reduction	IEP	Neighborhood
BP	GO:0051453	regulation of intracellular pH	IEP	Neighborhood
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0071453	cellular response to oxygen levels	IEP	Neighborhood
BP	GO:0071456	cellular response to hypoxia	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR009009	RlpA-like_DPBB	77	160
IPR007117	Expansin_CBD	171	248

External Links

No external refs found!

AT5G39270 (EXPA22, ATEXP22,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation