AT5G39290 (ATEXP26, ATHEXP ALPHA...)

Aliases : ATEXP26, ATHEXP ALPHA 1.16, EXP26

Description : expansin A26

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0015459 (LandPlants) Phylogenetic Tree(s): OG_05_0015459_tree ,
OG_06_0015188 (SeedPlants) Phylogenetic Tree(s): OG_06_0015188_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39290
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00230920	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.05	Archaeplastida
AMTR_s00119p00058870	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
AT5G39260	EXPA21, EXP21,...	expansin A21	0.06	Archaeplastida
GSVIVT01028474001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
GSVIVT01030191001	No alias	Expansin-A8 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_01048	No alias	alpha-class expansin	0.04	Archaeplastida
Gb_07423	No alias	alpha-class expansin	0.04	Archaeplastida
Gb_20678	No alias	alpha-class expansin	0.04	Archaeplastida
LOC_Os01g14660.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os02g16730.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os02g16839.1	No alias	alpha-class expansin	0.05	Archaeplastida
LOC_Os06g01920.1	No alias	alpha-class expansin	0.02	Archaeplastida
LOC_Os10g30340.1	No alias	alpha-class expansin	0.03	Archaeplastida
LOC_Os10g39110.1	No alias	alpha-class expansin	0.03	Archaeplastida
MA_10020g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_130258g0010	No alias	alpha-class expansin	0.03	Archaeplastida
MA_14588g0010	No alias	alpha-class expansin	0.02	Archaeplastida
MA_18265g0010	No alias	alpha-class expansin	0.02	Archaeplastida
MA_45587g0020	No alias	alpha-class expansin	0.04	Archaeplastida
Mp3g22690.1	No alias	alpha-class expansin	0.02	Archaeplastida
Pp3c13_20360V3.1	No alias	expansin A9	0.02	Archaeplastida
Pp3c14_18450V3.1	No alias	expansin A14	0.02	Archaeplastida
Pp3c8_15200V3.1	No alias	expansin A1	0.02	Archaeplastida
Smo231226	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.06	Archaeplastida
Smo91129	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.06	Archaeplastida
Solyc02g088100.3.1	No alias	alpha-class expansin	0.03	Archaeplastida
Solyc03g115270.3.1	No alias	alpha-class expansin	0.03	Archaeplastida
Zm00001e003887_P001	No alias	alpha-class expansin	0.02	Archaeplastida
Zm00001e003888_P001	No alias	alpha-class expansin	0.02	Archaeplastida
Zm00001e003889_P001	No alias	alpha-class expansin	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0032350	regulation of hormone metabolic process	IEP	Neighborhood
BP	GO:0048513	animal organ development	IEP	Neighborhood
BP	GO:0048569	post-embryonic animal organ development	IEP	Neighborhood
MF	GO:0070001	aspartic-type peptidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	171	248
IPR009009	RlpA-like_DPBB	77	160

External Links

No external refs found!

AT5G39290 (ATEXP26, ATHEXP ALPHA...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation