MA_18267g0010


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0026691 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18267g0010
Cluster HCCA: Cluster_500

Target Alias Description ECC score Gene Family Method Actions
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.06 Archaeplastida
AT1G47655 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.11 Archaeplastida
Gb_20867 No alias Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_23561 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g49440.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g48570.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 79 136
No external refs found!