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  5. MA_18290g0030

MA_18290g0030


Description : component TRA1 of SAGA transcription co-activator complex


Gene families : OG0001726 (Archaeplastida) Phylogenetic Tree(s): OG0001726_tree ,
OG_05_0002263 (LandPlants) Phylogenetic Tree(s): OG_05_0002263_tree ,
OG_06_0001755 (SeedPlants) Phylogenetic Tree(s): OG_06_0001755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_18290g0030
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03799p00000720 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT2G17930 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.02 Archaeplastida
Cpa|evm.model.tig00021537.68 No alias No description available 0.02 Archaeplastida
Cre02.g088750 No alias Protein modification.phosphorylation.atypical kinase... 0.03 Archaeplastida
LOC_Os07g45070.1 No alias component TRA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os07g45074.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10427352g0010 No alias component TRA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Mp5g23620.1 No alias component TRA1 of SAGA transcription co-activator... 0.03 Archaeplastida
Pp3c17_20000V3.1 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.03 Archaeplastida
Smo98463 No alias Protein modification.phosphorylation.atypical kinase... 0.02 Archaeplastida
Zm00001e035713_P005 No alias component TRA1 of SAGA transcription co-activator... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR003151 PIK-rel_kinase_FAT 709 800
IPR003151 PIK-rel_kinase_FAT 497 707
No external refs found!