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MA_186059g0010


Description : Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana (sp|o49343|pp177_arath : 138.0)


Gene families : OG0012857 (Archaeplastida) Phylogenetic Tree(s): OG0012857_tree ,
OG_05_0011990 (LandPlants) Phylogenetic Tree(s): OG_05_0011990_tree ,
OG_06_0012771 (SeedPlants) Phylogenetic Tree(s): OG_06_0012771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_186059g0010
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g06370.2 No alias Pentatricopeptide repeat-containing protein At2g30780... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 371 404
IPR002885 Pentatricopeptide_repeat 114 169
No external refs found!