1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_186340g0010

MA_186340g0010


Description : component RPL13a of LSU proteome component


Gene families : OG0002232 (Archaeplastida) Phylogenetic Tree(s): OG0002232_tree ,
OG_05_0002287 (LandPlants) Phylogenetic Tree(s): OG_05_0002287_tree ,
OG_06_0002922 (SeedPlants) Phylogenetic Tree(s): OG_06_0002922_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_186340g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00144180 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
AMTR_s00089p00040540 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 Archaeplastida
AT3G07110 No alias Ribosomal protein L13 family protein 0.3 Archaeplastida
AT3G24830 No alias Ribosomal protein L13 family protein 0.42 Archaeplastida
AT4G13170 No alias Ribosomal protein L13 family protein 0.16 Archaeplastida
AT5G48760 No alias Ribosomal protein L13 family protein 0.38 Archaeplastida
Cpa|evm.model.tig00000792.29 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
Cre12.g532550 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01021080001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01028661001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
LOC_Os03g54890.1 No alias component RPL13a of LSU proteome component 0.33 Archaeplastida
LOC_Os07g01870.1 No alias component RPL13a of LSU proteome component 0.05 Archaeplastida
Mp2g08690.1 No alias component RPL13a of LSU proteome component 0.41 Archaeplastida
Mp4g15790.1 No alias component RPL13a of LSU proteome component 0.39 Archaeplastida
Pp3c11_17280V3.1 No alias Ribosomal protein L13 family protein 0.18 Archaeplastida
Pp3c19_10330V3.1 No alias Ribosomal protein L13 family protein 0.31 Archaeplastida
Pp3c1_15830V3.1 No alias Ribosomal protein L13 family protein 0.2 Archaeplastida
Pp3c2_20550V3.1 No alias Ribosomal protein L13 family protein 0.28 Archaeplastida
Pp3c7_12270V3.1 No alias Ribosomal protein L13 family protein 0.13 Archaeplastida
Smo166650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
Solyc05g053670.3.1 No alias component RPL13a of LSU proteome component 0.37 Archaeplastida
Solyc09g091740.4.1 No alias component RPL13a of LSU proteome component 0.39 Archaeplastida
Solyc12g098330.3.1 No alias no hits & (original description: none) 0.35 Archaeplastida
Zm00001e005719_P002 No alias component RPL13a of LSU proteome component 0.36 Archaeplastida
Zm00001e012017_P002 No alias component RPL13a of LSU proteome component 0.3 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 13 121
No external refs found!