Description : component RPL21 of LSU proteome component
Gene families : OG0001742 (Archaeplastida) Phylogenetic Tree(s): OG0001742_tree ,
OG_05_0002541 (LandPlants) Phylogenetic Tree(s): OG_05_0002541_tree ,
OG_06_0002619 (SeedPlants) Phylogenetic Tree(s): OG_06_0002619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_186351g0010 | |
Cluster | HCCA: Cluster_199 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00252940 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
AMTR_s00024p00178920 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
AT1G09590 | No alias | Translation protein SH3-like family protein | 0.06 | Archaeplastida | |
AT1G09690 | No alias | Translation protein SH3-like family protein | 0.07 | Archaeplastida | |
AT1G57660 | No alias | Translation protein SH3-like family protein | 0.07 | Archaeplastida | |
Cpa|evm.model.tig00000640.5 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
Cre06.g278135 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
GSVIVT01001130001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
GSVIVT01033444001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | Archaeplastida | |
GSVIVT01033455001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
Gb_09077 | No alias | component RPL21 of LSU proteome component | 0.06 | Archaeplastida | |
LOC_Os03g04750.1 | No alias | component RPL21 of LSU proteome component | 0.09 | Archaeplastida | |
LOC_Os10g32820.1 | No alias | component RPL21 of LSU proteome component | 0.05 | Archaeplastida | |
Mp6g01390.1 | No alias | component RPL21 of LSU proteome component | 0.11 | Archaeplastida | |
Pp3c12_9320V3.1 | No alias | Translation protein SH3-like family protein | 0.07 | Archaeplastida | |
Pp3c13_2360V3.1 | No alias | Translation protein SH3-like family protein | 0.07 | Archaeplastida | |
Pp3c3_5550V3.1 | No alias | Translation protein SH3-like family protein | 0.09 | Archaeplastida | |
Pp3c4_21520V3.1 | No alias | Translation protein SH3-like family protein | 0.07 | Archaeplastida | |
Smo170832 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
Solyc10g078960.2.1 | No alias | component RPL21 of LSU proteome component | 0.08 | Archaeplastida | |
Solyc10g080590.2.1 | No alias | component RPL21 of LSU proteome component | 0.06 | Archaeplastida | |
Zm00001e000341_P001 | No alias | component RPL21 of LSU proteome component | 0.02 | Archaeplastida | |
Zm00001e004623_P001 | No alias | component RPL21 of LSU proteome component | 0.02 | Archaeplastida | |
Zm00001e012727_P001 | No alias | component RPL21 of LSU proteome component | 0.04 | Archaeplastida | |
Zm00001e038963_P001 | No alias | component RPL21 of LSU proteome component | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006605 | protein targeting | IEP | Neighborhood |
BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0008104 | protein localization | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
BP | GO:0015031 | protein transport | IEP | Neighborhood |
BP | GO:0015833 | peptide transport | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
CC | GO:0035145 | exon-exon junction complex | IEP | Neighborhood |
BP | GO:0042886 | amide transport | IEP | Neighborhood |
BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001147 | Ribosomal_L21e | 1 | 101 |
No external refs found! |