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MA_187587g0020


Description : RS31/40/41 RNA splicing factor


Gene families : OG0001617 (Archaeplastida) Phylogenetic Tree(s): OG0001617_tree ,
OG_05_0001638 (LandPlants) Phylogenetic Tree(s): OG_05_0001638_tree ,
OG_06_0001180 (SeedPlants) Phylogenetic Tree(s): OG_06_0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_187587g0020
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Archaeplastida
Mp8g04570.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.05 Archaeplastida
Zm00001e025270_P001 No alias RS31/40/41 RNA splicing factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 135 197
IPR000504 RRM_dom 41 100
No external refs found!