AT5G40220 (AGL43)

Aliases : AGL43

Description : AGAMOUS-like 43

Gene families : OG0008125 (Archaeplastida) Phylogenetic Tree(s): OG0008125_tree ,
OG_05_0006730 (LandPlants) Phylogenetic Tree(s): OG_05_0006730_tree ,
OG_06_0004264 (SeedPlants) Phylogenetic Tree(s): OG_06_0004264_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT5G40220
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AT4G11250 AGL52 AGAMOUS-like 52 0.03 Archaeplastida
AT5G27050 AGL101 AGAMOUS-like 101 0.01 Archaeplastida
AT5G27580 AGL89 AGAMOUS-like 89 0.08 Archaeplastida
AT5G37415 AGL105 AGAMOUS-like 105 0.07 Archaeplastida
AT5G39810 AGL98 AGAMOUS-like 98 0.03 Archaeplastida
AT5G41200 AGL75 AGAMOUS-like 75 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 18 57
No external refs found!